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Ngs in hereditary ataxia: When rare becomes frequent

  • D. Galatolo
  • , Michele G. De
  • , Gabriella Silvestri
  • , V. Leuzzi
  • , C. Casali
  • , O. Musumeci
  • , A. Antenora
  • , G. Astrea
  • , M. Barghigiani
  • , R. Battini
  • , C. Battisti
  • , C. Caputi
  • , E. Cioffi
  • , Michele G. De
  • , M. T. Dotti
  • , T. Fico
  • , C. Fiorillo
  • , S. Galosi
  • , M. Lieto
  • , A. Malandrini
  • M. A. B. Melone, A. Mignarri, G. Natale, E. Pegoraro, A. Petrucci, I. Ricca, V. Riso, Salvatore Rossi, A. Rubegni, A. Scarlatti, F. Tinelli, R. Trovato, G. Tedeschi, A. Tessa*, A. Filla*, F. M. Santorelli*
*Corresponding author
  • IRCCS Fondazione Stella Maris - Calambrone (Pisa)
  • University of Naples Federico II
  • University of Rome La Sapienza
  • University of Messina
  • University of Siena
  • University of Genoa
  • University of Padua
  • San Camillo Hospital
  • University of Campania Luigi Vanvitelli

Research output: Contribution to journalArticle

Abstract

The term hereditary ataxia (HA) refers to a heterogeneous group of neurological disorders with multiple genetic etiologies and a wide spectrum of ataxia‐dominated phenotypes. Massive gene analysis in next‐generation sequencing has entered the HA scenario, broadening our genetic and clinical knowledge of these conditions. In this study, we employed a targeted resequencing panel (TRP) in a large and highly heterogeneous cohort of 377 patients with a clinical diagnosis of HA, but no molecular diagnosis on routine genetic tests. We obtained a positive result (genetic diagnosis) in 33.2% of the patients, a rate significantly higher than those reported in similar studies employing TRP (average 19.4%), and in line with those performed using exome sequencing (ES, average 34.6%). Moreover, 15.6% of the patients had an uncertain molecular diagnosis. STUB1, PRKCG, and SPG7 were the most common causative genes. A comparison with published literature data showed that our panel would have identified 97% of the positive cases reported in previous TRP‐based studies and 92% of those diagnosed by ES. Proper use of multigene panels, when combined with detailed phenotypic data, seems to be even more efficient than ES in clinical practice.
Original languageEnglish
Pages (from-to)8490-N/A
JournalInternational Journal of Molecular Sciences
Volume22
Issue number16
DOIs
Publication statusPublished - 2021

All Science Journal Classification (ASJC) codes

  • Catalysis
  • Molecular Biology
  • Spectroscopy
  • Computer Science Applications
  • Physical and Theoretical Chemistry
  • Organic Chemistry
  • Inorganic Chemistry

Keywords

  • 80 and over
  • Adolescent
  • Adult
  • Aged
  • Child
  • Cohort
  • Diagnostic yield
  • Exome sequencing
  • Female
  • Genesis
  • Genetic Testing
  • HA
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Male
  • Middle Aged
  • Mutation
  • Next‐generation sequencing
  • Preschool
  • Spinocerebellar Degenerations
  • TRP
  • Targeted resequencing panel
  • Variant
  • Whole Exome Sequencing
  • Young Adult

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