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Analysis of Clinical Phenotypes through Machine Learning of First-Line H. pylori Treatment in Europe during the Period 2013-2022: Data from the European Registry on H. pylori Management (Hp-EuReg)

  • Olga P Nyssen
  • , Pietro Pratesi
  • , Miguel A Spínola
  • , Laimas Jonaitis
  • , Ángeles Pérez-Aísa
  • , Dino Vaira
  • , Ilaria Maria Saracino
  • , Matteo Pavoni
  • , Giulia Fiorini
  • , Bojan Tepes
  • , Dmitry S Bordin
  • , Irina Voynovan
  • , Ángel Lanas
  • , Samuel J Martínez-Domínguez
  • , Enrique Alfaro
  • , Luis Bujanda
  • , Manuel Pabón-Carrasco
  • , Luis Hernández
  • , Antonio Gasbarrini
  • , Juozas Kupcinskas
  • Frode Lerang, Sinead M Smith, Oleksiy Gridnyev, Mārcis Leja, Theodore Rokkas, Ricardo Marcos-Pinto, Antonio Meštrović, Wojciech Marlicz, Vladimir Milivojevic, Halis Simsek, Lumir Kunovsky, Veronika Papp, Perminder S Phull, Marino Venerito, Lyudmila Boyanova, Doron Boltin, Yaron Niv, Tamara Matysiak-Budnik, Michael Doulberis, Daniela Dobru, Vincent Lamy, Lisette G Capelle, Emilija Nikolovska Trpchevska, Leticia Moreira, Anna Cano-Català, Pablo Parra, Francis Mégraud, Colm O'Morain, Guillermo J Ortega*, Javier P Gisbert, null On Behalf Of The Hp-EuReg Investigators
*Corresponding author
  • University of Milan - Bicocca
  • Lithuanian University of Health Sciences
  • Hospital Costa Del Sol
  • Alma Mater Studiorum University of Bologna
  • AS Loginov Moscow Clinical Scientific Center
  • Instituto de Investigación Sanitaria Aragón (IISA)
  • CIBER - Center for Biomedical Research Network
  • Hospital Clínico Univeritario Lozano Blesa
  • University of the Basque Country
  • Biodonostia Health Research Institute
  • Hospital Universitario de Valme
  • Gerencia Regional de Salud de Castilla y León
  • Government Institution L.T.Malaya Therapy National Institute of the National Academy of Medical Sciences of Ukraine
  • University of Latvia
  • Henry Dunant Hospital
  • University of Porto (ICBAS.UP)
  • University of Porto
  • University Hospital Center of Santo António
  • School of Medicine, University of Split
  • Split University Hospital
  • Pomeranian Medical University in Szczecin
  • University of Belgrade
  • Clinical Center of Serbia
  • Hacettepe University
  • University Hospital of Olomouc
  • Palacký University Olomouc
  • Masaryk Memorial Cancer Institute
  • Masaryk University
  • Semmelweis University
  • Otto von Guericke University Magdeburg
  • Medical University Sofia
  • Tel Aviv University
  • Ariel University
  • CHU de Nantes
  • Cantonal Hospital Aarau
  • George Emil Palade University of Medicine, Pharmacy, Science and Technology of Targu Mures
  • Centre Hospitalier Universitaire de Charleroi
  • University Clinic of Gastroenterohepatology
  • SS Cyril and Methodius University in Skopje
  • University of Barcelona
  • Hematology, Hospital Clínic
  • Internal Medicine Department
  • Hospital Universitario de la Princesa
  • Universidad Autónoma de Madrid
  • Université de Bordeaux

Research output: Contribution to journalArticle

Abstract

The segmentation of patients into homogeneous groups could help to improve eradication therapy effectiveness. Our aim was to determine the most important treatment strategies used in Europe, to evaluate first-line treatment effectiveness according to year and country. Data collection: All first-line empirical treatments registered at AEGREDCap in the European Registry on Helicobacter pylori management (Hp-EuReg) from June 2013 to November 2022. A Boruta method determined the "most important" variables related to treatment effectiveness. Data clustering was performed through multi-correspondence analysis of the resulting six most important variables for every year in the 2013-2022 period. Based on 35,852 patients, the average overall treatment effectiveness increased from 87% in 2013 to 93% in 2022. The lowest effectiveness (80%) was obtained in 2016 in cluster #3 encompassing Slovenia, Lithuania, Latvia, and Russia, treated with 7-day triple therapy with amoxicillin-clarithromycin (92% of cases). The highest effectiveness (95%) was achieved in 2022, mostly in Spain (81%), with the bismuth-quadruple therapy, including the single-capsule (64%) and the concomitant treatment with clarithromycin-amoxicillin-metronidazole/tinidazole (34%) with 10 (69%) and 14 (32%) days. Cluster analysis allowed for the identification of patients in homogeneous treatment groups assessing the effectiveness of different first-line treatments depending on therapy scheme, adherence, country, and prescription year.
Original languageEnglish
Pages (from-to)N/A-N/A
JournalAntibiotics
Volume12
Issue number9
DOIs
Publication statusPublished - 2023

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

All Science Journal Classification (ASJC) codes

  • Microbiology
  • Biochemistry
  • General Pharmacology, Toxicology and Pharmaceutics
  • Microbiology (medical)
  • Infectious Diseases
  • Pharmacology (medical)

Keywords

  • Helicobacter pylori
  • clustering
  • eradication
  • machine learning
  • phenotyping
  • treatment

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