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A computational model for eukaryotic directional sensing

  • Andrea Gamba
  • , Antonio De Candia
  • , Fausto Cavalli
  • , Stefano Di Talia
  • , Antonio Coniglio
  • , Federico Bussolino
  • , Guido Serini
  • Polytechnic University of Turin
  • University of Naples Federico II
  • Rockefeller University
  • University of Turin

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Many eukaryotic cell types share the ability to migrate directionally in response to external chemoattractant gradients. This ability is central in the development of complex organisms, and is the result of billion years of evolution. Cells exposed to shallow gradients in chemoattractant concentration respond with strongly asymmetric accumulation of several signaling factors, such as phosphoinositides and enzymes. This early symmetry-breaking stage is believed to trigger effector pathways leading to cell movement. Although many factors implied in directional sensing have been recently discovered, the physical mechanism of signal amplification is not yet well understood. We have proposed that directional sensing is the consequence of a phase ordering process mediated by phosphoinositide diffusion and driven by the distribution of chemotactic signal. By studying a realistic computational model that describes enzymatic activity, recruitment to the plasmamembrane, and diffusion of phosphoinositide products we have shown that the effective enzyme-enzyme interaction induced by catalysis and diffusion introduces an instability of the system towards phase separation for realistic values of physical parameters. In this framework, large reversible amplification of shallow chemotactic gradients, selective localization of chemical factors, macroscopic response timescales, and spontaneous polarization arise.
Original languageEnglish
Title of host publicationCOMPUTATIONAL METHODS IN SYSTEMS BIOLOGY, PROCEEDINGS
Pages184-195
Number of pages12
DOIs
Publication statusPublished - 2006
EventInternational Conference on Computational Methods in Systems Biology - Trento
Duration: 18 Oct 200619 Oct 2006

Publication series

NameLECTURE NOTES IN COMPUTER SCIENCE

Conference

ConferenceInternational Conference on Computational Methods in Systems Biology
CityTrento
Period18/10/0619/10/06

Keywords

  • CELL-MIGRATION
  • CHEMOTAXIS

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